Peer-reviewed publications
Showing entries 1 - 50 out of 585
2025
Fruehwald, HM, Liebsch, Y, Javed, U, Lebius, H, Grygiel, C, Rahali, R, Kotakoski, J, Schleberger, M & Smith, RDL 2025, 'Basal-Plane Pores Activate Monolayer MoS2 for the Hydrogen Evolution Reaction', ACS Catalysis, vol. 15, no. 5, pp. 3768-3776. https://doi.org/10.1021/acscatal.4c07970
Kröckel, C, Ludacka, U, Singh, R, Kotakoski, J, Hauke, F, Hirsch, A, Reich, S & Chacón-Torres, JC 2025, 'Structural stability in potassium doped single-walled carbon nanotubes, and surface functionalization', Carbon, vol. 234, 119992. https://doi.org/10.1016/j.carbon.2025.119992
Speckmann, C, Mustonen, K, Propst, D, Mangler, C & Kotakoski, J 2025, 'Electron irradiation effects on monolayer MoS2 at elevated temperatures', Physical Review B, vol. 111, no. 5, 054107. https://doi.org/10.48550/arXiv.2411.03200, https://doi.org/10.1103/PhysRevB.111.054107
Rafailović, LD, Noisternig, SM, Bischoff, J, Rentenberger, C, Bautista – Anguis, D, Sheng, H, Gammer, C, Chin, JM, Elbataioui, A, Zhang, H, Eckert, J & Trišović, TL 2025, 'Enhanced Control of Single Crystalline Ag Dendritic Growth on Al Foil via Galvanic Displacement and Simultaneous Oxidation of D-Glucose', Small Science. https://doi.org/10.1002/smsc.202400478
2024
Speckmann, C, Angeletti, A, Kývala, L, Lamprecht, D, Herterich, F, Mangler, C, Filipovic, L, Dellago, C, Franchini, C & Kotakoski, J 2024, 'Electron-Beam-Induced Adatom-Vacancy-Complexes in Mono- and Bilayer Phosphorene', Advanced Materials Interfaces. https://doi.org/10.48550/arXiv.2409.11102, https://doi.org/10.1002/admi.202400784
Chesnyak, V, Perilli, D, Panighel, M, Namar, A, Markevich, A, Bui, TTA, Ugolotti, A, Farooq, A, Stredansky, M, Kofler, C, Cepek, C, Comelli, G, Kotakoski, J, Di Valentin, C & Africh, C 2024, 'Scalable bottom-up synthesis of Co-Ni–doped graphene', Science Advances, vol. 10, no. 45, eado8956. https://doi.org/10.1126/sciadv.ado8956
Propst, D, Joudi, W, Längle, M, Madsen, J, Kofler, C, Mayer, BM, Lamprecht, D, Mangler, C, Filipovic, L, Susi, T & Kotakoski, J 2024, 'Automated image acquisition and analysis of graphene and hexagonal boron nitride from pristine to highly defective and amorphous structures', Scientific Reports, vol. 14, no. 1, 26939. https://doi.org/10.1038/s41598-024-77740-9
Noisternig, SM, Rentenberger, C, Gammer, C, Karnthaler, HP & Kotakoski, J 2024, 'Probing the interaction range of electron beam-induced etching in STEM by a non-contact electron beam', Ultramicroscopy, vol. 265, 114019. https://doi.org/10.1016/j.ultramic.2024.114019
Krawczynska, AT, Michalicha, A, Suchecki, P, Budniak, K, Roguska, A, Kerber, M, Setman, D, Spychalski, M, Adamczyk-Cieslak, B, Liedke, MO, Butterling, M, Hirschmann, E, Wagner, A, Lewandowska, M & Belcarz, A 2024, 'Enhancing anti-adhesion properties by designing microstructure - the microscopy and spectroscopy study of the intercellular bacterial response', Scientific Reports, vol. 14, 24549. https://doi.org/10.1038/s41598-024-75045-5
Tabachnikova, ED, Smirnov, SN, Shapovalov, YO, Kolodiy, IV, Levenets, AV, Tikhonovsky, MA, Zehetbauer, MJ, Rentenberger, C, Schafler, E, Huang, Y & Langdon, TG 2024, 'Effect of V Content on the Microstructure and Mechanical Properties of High-Pressure Torsion Nanostructured CoCrFeMnNiVx High-Entropy Alloys', Advanced Engineering Materials, vol. 26, no. 19, 2400692. https://doi.org/10.1002/adem.202400692
Gammer, C, Mangler, C, Karnthaler, HP & Rentenberger, C 2024, 'Grain-Size-Dependent Plastic Behavior in Bulk Nanocrystalline FeAl', Advanced Engineering Materials, vol. 26, no. 19, 2400536. https://doi.org/10.1002/adem.202400536
Trentino, A, Zagler, G, Längle, M, Madsen, J, Susi, T, Mangler, C, Åhlgren, EH, Mustonen, K & Kotakoski, J 2024, 'Single atoms and metal nanoclusters anchored to graphene vacancies', Micron, vol. 184, 103667. https://doi.org/10.1016/j.micron.2024.103667
Javed, U, Speckmann, C, Joudi, W, Längle, M, Trentino, A, Ahlgren, EH, Lamprecht, D, Mangler, C, Mustonen, K, Susi, T & Kotakoski, J 2024, 'Scanning Transmission Electron Microscopy as a Part of an Integrated Vacuum Setup for Growth and Manipulation of 2D Materials', Microscopy and Microanalysis, vol. 30, no. Supplement_1, ozae044.547. https://doi.org/10.1093/mam/ozae044.547
Heuser, D, Dubosq, R, Petrishcheva, E, Bian, G, Rentenberger, C, Lengauer, CL, Gault, B, Habler, G & Abart, R 2024, 'Coherent solvus of disordered alkali feldspar: experiment, atom probe tomography and thermodynamic model', Contributions to Mineralogy and Petrology, vol. 179, no. 6, 68. https://doi.org/10.1007/s00410-024-02150-z
Längle, M, Mizohata, K, Mangler, C, Trentino, A, Mustonen, K, Åhlgren, EH & Kotakoski, J 2024, 'Two-dimensional few-atom noble gas clusters in a graphene sandwich', Nature Materials, vol. 23, no. 6, pp. 762–767. https://doi.org/10.48550/arXiv.2306.15436, https://doi.org/10.1038/s41563-023-01780-1
Mortensen, JJ, Larsen, AH, Kuisma, M, Ivanov, AV, Taghizadeh, A, Peterson, A, Haldar, A, Dohn, AO, Schäfer, C, Jónsson, EÖ, Hermes, ED, Nilsson, FA, Kastlunger, G, Levi, G, Jónsson, H, Häkkinen, H, Fojt, J, Kangsabanik, J, Sødequist, J, Lehtomäki, J, Heske, J, Enkovaara, J, Winther, KT, Dulak, M, Melander, MM, Ovesen, M, Louhivuori, M, Walter, M, Gjerding, M, Lopez-Acevedo, O, Erhart, P, Warmbier, R, Würdemann, R, Kaappa, S, Latini, S, Boland, TM, Bligaard, T, Skovhus, T, Susi, T, Maxson, T, Rossi, T, Chen, X, Schmerwitz, YLA, Schiøtz, J, Olsen, T, Jacobsen, KW & Thygesen, KS 2024, 'GPAW: An open Python package for electronic structure calculations', Journal of Chemical Physics, vol. 160, no. 9, 092503. https://doi.org/10.1063/5.0182685
Lucherelli, MA, Stiegler, LMS, Steiger, F, Åhlgren, EH, Requena-Ramírez, J, Castro, E, Echegoyen, L, Hirsch, A, Peukert, W, Kotakoski, J, Walter, J, Pérez-Ojeda, ME & Abellán, G 2024, 'Carbon nano-onions: Individualization and enhanced water dispersibility', Carbon, vol. 218, 118760. https://doi.org/10.1016/j.carbon.2023.118760
2023
Niggas, A, Fischer, L, Kretschmer, S, Werl, M, Biber, H, Speckmann, C, McEvoy, N, Kotakoski, J, Aumayr, F, Krasheninnikov, AV & Wilhelm, RA 2023, 'Charge-exchange-dependent energy loss of H and He in freestanding monolayers of graphene and MoS2', Physical Review A, vol. 108, no. 6, 062823. https://doi.org/10.1103/PhysRevA.108.062823
Zhussupbekov, K, Ansari, L, Elibol, K, Zhussupbekova, A, Kotakoski, J, Shvets, IV, Duesberg, GS, Hurley, PK, McEvoy, N, Ó Coileáin, C & Gity, F 2023, 'Revealing the influence of edge states on the electronic properties of PtSe2', Applied Materials Today, vol. 35, 101926. https://doi.org/10.1016/j.apmt.2023.101926
Zagler, G, Trentino, A, Mustonen, K, Mangler, C & Kotakoski, J 2023, 'Interface effects on titanium growth on graphene', 2D Materials, vol. 10, no. 4, 045025. https://doi.org/10.1088/2053-1583/acf22e
Propst, D, Kotakoski, J & Ahlgren, EH 2023, 'Impurity atom configurations in diamond and their visibility via scanning transmission electron microscopy imaging', Electronic Structure, vol. 5, no. 3, 033004. https://doi.org/10.1088/2516-1075/acf9d3
Bui, TA, Leuthner, GT, Madsen, J, Monazam, MRA, Chirita, AI, Postl, A, Mangler, C, Kotakoski, J & Susi, T 2023, 'Creation of Single Vacancies in hBN with Electron Irradiation', Small, vol. 19, no. 39, 2301926 . https://doi.org/10.48550/arXiv.2303.00497, https://doi.org/10.1002/smll.202301926
Brembs, B, Huneman, P, Schönbrodt, F, Nilsonne, G, Susi, T, Siems, R, Perakakis, P, Trachana, V, Ma, L & Rodriguez-Cuadrado, S 2023, 'Replacing academic journals', Royal Society Open Science, vol. 10, no. 7, 230206. https://doi.org/10.1098/rsos.230206
Hofer, C, Mustonen, K, Skakalova, V & Pennycook, TJ 2023, 'Picometer-precision few-tilt ptychotomography of 2D materials', 2D Materials, vol. 10, no. 3, 035029. https://doi.org/10.1088/2053-1583/acdd80
Schloz, M, Müller, J, Pekin, TC, Van den Broek, W, Madsen, J, Susi, T & Koch, CT 2023, 'Deep reinforcement learning for data-driven adaptive scanning in ptychography', Scientific Reports, vol. 13, no. 1, 8732. https://doi.org/10.48550/arXiv.2203.15413, https://doi.org/10.1038/s41598-023-35740-1
Amati, M, Susi, T, Jovičević-Klug, P, Jovičević-Klug, M, Kosmala, T, Granozzi, G, Agnoli, S, Yang, P, Zhang, Y, Scardamaglia, M & Gregoratti, L 2023, 'Scanning photoelectron spectromicroscopy: From static to operando studies of functional materials', Journal of Electron Spectroscopy and Related Phenomena, vol. 265, 147336. https://doi.org/10.1016/j.elspec.2023.147336
Soltan, S, Macke, S, Ilse, SE, Pennycook, T, Zhang, ZL, Christiani, G, Benckiser, E, Schütz, G & Goering, E 2023, 'Ferromagnetic order controlled by the magnetic interface of LaNiO3/La2/3Ca1/3MnO3 superlattices', Scientific Reports, vol. 13, no. 1, 3847. https://doi.org/10.1038/s41598-023-30814-6
Speckmann, C, Lang, J, Madsen, J, Ahmadpour Monazam, MR, Zagler, G, Leuthner, GT, McEvoy, N, Mangler, C, Susi, T & Kotakoski, J 2023, 'Combined electronic excitation and knock-on damage in monolayer MoS2', Physical Review B, vol. 107, no. 9, 094112. https://doi.org/10.1103/PhysRevB.107.094112
Kerber, M, Waitz, T & Matsuda, M 2023, 'Structural changes of TiPt high-temperature shape memory alloys induced by high pressure torsion', Journal of Alloys and Compounds, vol. 935, 168037. https://doi.org/10.1016/j.jallcom.2022.168037
Antoni, M, Spieckermann, F, Plutta, N, Gammer, C, Kapp, M, Ramasamy, P, Polak, C, Pippan, R, Zehetbauer, MJ & Eckert, J 2023, 'Can Severe Plastic Deformation Tune Nanocrystallization in Fe-Based Metallic Glasses?', Materials, vol. 16, no. 3, 1260. https://doi.org/10.3390/ma16031260
Li, Z, Rose, H, Madsen, J, Biskupek, J, Susi, T & Kaiser, U 2023, 'Computationally Efficient Handling of Partially Coherent Electron Sources in (S)TEM Image Simulations via Matrix Diagonalization', Microscopy and Microanalysis, vol. 29, no. 1, pp. 364–373. https://doi.org/10.1017/S1431927622012387
Villarreal, R, Lin, P-C, Zarkua, Z, Bana, H, Tsai, H-C, Auge, M, Junge, F, Hofsäss, H, Tosi, E, De Feyter, S, De Gendt, S, Brems, S, Åhlgren, EH & Pereira, LMC 2023, 'Bond defects in graphene created by ultralow energy ion implantation', Carbon, vol. 203, pp. 590-600. https://doi.org/10.1016/j.carbon.2022.12.005
Elibol, K, Susi, T, Mangler, C, Eder, D, Meyer, JC, Kotakoski, J, Hobbs, RG, van Aken, PA & Bayer, BC 2023, 'Linear indium atom chains at graphene edges', npj 2D Materials and Applications, vol. 7, no. 1, 2. https://doi.org/10.1038/s41699-023-00364-6
Heuser, DA, Dubosq, R, Bian, G, Habler, G, Petrishcheva, E, Gault, B, Lengauer, CL, Rentenberger, C & Abart, R 2023, 'The compositions of coherent exsolution lamellae in alkali feldspar measured with atom probe tomography', Mitteilungen der Österreichischen Mineralogischen Gesellschaft.
2022
Edalati, K, Wang, Q, Enikeev, NA, Peters, L-J, Zehetbauer, MJ & Schafler, E 2022, 'Significance of strain rate in severe plastic deformation on steady-state microstructure and strength', Materials Science and Engineering A, vol. 859, 144231. https://doi.org/10.1016/j.msea.2022.144231
Ahlgren, EH, Markevich, A, Scharinger, S, Fickl, B, Zagler, G, Herterich, F, McEvoy, N, Mangler, C & Kotakoski, J 2022, 'Atomic-Scale Oxygen-Mediated Etching of 2D MoS2 and MoTe2', Advanced Materials Interfaces, vol. 9, no. 32, 2200987. https://doi.org/10.1002/admi.202200987
Susi, T 2022, 'Identifying and manipulating single atoms with scanning transmission electron microscopy', Chemical Communications, vol. 58, no. 88, pp. 12274-12285. https://doi.org/10.1039/D2CC04807H
Ali, FSM, Arevalo, RL, Vandichel, M, Speck, F, Rautama, E-L, Jiang, H, Sorsa, O, Mustonen, K, Cherevko, S & Kallio, T 2022, 'Hydrogen evolution in alkaline medium on intratube and surface decorated PtRu catalyst', Applied Catalysis B: Environmental, vol. 315, 121541. https://doi.org/10.1016/j.apcatb.2022.121541
Singh, R, Scheinecker, D, Ludacka, U & Kotakoski, J 2022, 'Corrugations in Free-Standing Graphene', Nanomaterials, vol. 12, no. 20, 3562. https://doi.org/10.3390/nano12203562
Tabachnikova, ED, Hryhorova, TV, Shumilin, SE, Kolodiy, IV, Shapovalov, YO, Semerenko, YO, Smirnov, SN, Kashuba, IV, Tikhonovsky, MA, Zehetbauer, MJ & Schafler, E 2022, 'Mechanical properties of a two-phase high-entropy Fe50Mn30Co10Cr10 alloy down to ultralow temperatures', Low Temperature Physics, vol. 48, no. 10, pp. 845-852. https://doi.org/10.1063/10.0014029
Kalinin, S, Ziatdinov, M, Spurgeon, SR, Ophus, C, Stach, EA, Susi, T, Agar, J & Randall, J 2022, 'Deep learning for electron and scanning probe microscopy: From materials design to atomic fabrication', MRS Bulletin, vol. 47, no. 9, pp. 931-939. https://doi.org/10.1557/s43577-022-00413-3
Krawczyńska, AT, Ciupiński, Ł, Gloc, M, Setman, D, Spychalski, M, Suchecki, P, Adamczyk-Cieślak, B, Liedke, MO, Butterling, M, Wanger, A, Hirschmann, E & Petersson, P 2022, 'Impact of high pressure torsion processing on helium ion irradiation resistance of molybdenum', Materials Characterization, vol. 191, 112151. https://doi.org/10.1016/j.matchar.2022.112151
Postl, A, Hilgert, PPP, Markevich, A, Madsen, J, Mustonen, K, Kotakoski, J & Susi, T 2022, 'Indirect measurement of the carbon adatom migration barrier on graphene', Carbon, vol. 196, pp. 596-601. https://doi.org/10.1016/j.carbon.2022.05.039
Niggas, A, Schwestka, J, Balzer, K, Weichselbaum, D, Schlünzen, N, Heller, R, Creutzburg, S, Inani, H, Tripathi, M, Speckmann, C, McEvoy, N, Susi, T, Kotakoski, J, Gan, Z, George, A, Turchanin, A, Bonitz, M, Aumayr, F & Wilhelm, RA 2022, 'Ion-Induced Surface Charge Dynamics in Freestanding Monolayers of Graphene and MoS2 Probed by the Emission of Electrons', Physical Review Letters, vol. 129, no. 8, 086802. https://doi.org/10.1103/PhysRevLett.129.086802
Golze, D, Hirvensalo, M, Hernandez-Leon, P, Aarva, A, Etula, J, Susi, T, Rinke, P, Laurila, T & Caro, MA 2022, 'Accurate Computational Prediction of Core-Electron Binding Energies in Carbon-Based Materials: A Machine-Learning Model Combining Density-Functional Theory and GW', Chemistry of Materials, vol. 34, no. 14, pp. 6240-6254. https://doi.org/10.1021/acs.chemmater.1c04279
Zagler, G, Stecher, M, Trentino, A, Kraft, F, Su, C, Postl, A, Längle, M, Pesenhofer, C, Mangler, C, Ahlgren, EH, Markevich, A, Zettl, A, Kotakoski, J, Susi, T & Mustonen, K 2022, 'Beam-driven dynamics of aluminium dopants in graphene', 2D Materials, vol. 9, no. 3, 035009. https://doi.org/10.1088/2053-1583/ac6c30
Chirita, A, Markevich, A, Tripathi, M, Pike, NA, Verstraete, MJ, Kotakoski, J & Susi, T 2022, 'Three-dimensional ab initio description of vibration-assisted electron knock-on displacements in graphene', Physical Review B, vol. 105, no. 23, 235419. https://doi.org/10.1103/PhysRevB.105.235419
Noisternig, SM, Rentenberger, C & Karnthaler, HP 2022, 'In situ STEM analysis of electron beam induced chemical etching of an ultra-thin amorphous carbon foil by oxygen during high resolution scanning', Ultramicroscopy, vol. 235, 113483. https://doi.org/10.1016/j.ultramic.2022.113483
Krawczynska, AT, Kerber, M, Suchecki, P, Romelczyk-Baishya, B, Liedke, MO, Butterling, M, Hirschmann, E, Wagner, A, Lewandowska, M & Setman, D 2022, 'The impact of high hydrostatic pressure maintenance after high-pressure torsion on phenomena during high hydrostatic pressure annealing', Materials Science and Engineering A, vol. 840, 142874. https://doi.org/10.1016/j.msea.2022.142874
Edalati, K, Bachmaier, A, Beloshenko, VA, Beygelzimer, Y, Blank, VD, Botta, WJ, Bryla, K, Čížek, J, Divinski, S, Enikeev, NA, Estrin, Y, Faraji, G, Figueiredo, RB, Fuji, M, Furuta, T, Grosdidier, T, Gubicza, J, Hohenwarter, A, Horita, Z, Huot, J, Ikoma, Y, Janecek, M, Kawasaki, M, Kral, P, Kuramoto, S, Langdon, TG, Leiva, DR, Levitas, V, Mazilkin, A, Mito, M, Miyamoto, H, Nishizaki, T, Pippan, R, Popov, VV, Popova, EN, Purcek, G, Renk, O, Revesz, A, Sauvage, X, Sklenicka, V, Skrotzki, W, Straumal, BB, Suwas, S, Toth, LS, Tsuji, N, Valiev, RZ, Wilde, G, Zehetbauer, MJ & Zhu, X 2022, 'Nanomaterials by severe plastic deformation: review of historical developments and recent advances', Materials Research Letters, vol. 10, no. 4, pp. 163-256. https://doi.org/10.1080/21663831.2022.2029779